晋西黄土区典型乔灌木短期水分利用效率对环境因子的响应

为明确晋西黄土区植物的水分利用规律及对半干旱区的适应策略, 提高黄土地区植被建设效益, 该研究对该地区典型乔灌木短期水分利用效率随环境因子的变化进行了探究。以典型乔木油松(Pinus tabuliformis)、刺槐(Robinia pseudoacacia)及其林下灌木黄刺玫(Rosa xanthina)、杠柳(Periploca sepium)为研究对象, 测定叶片可溶性糖稳定碳同位素比值(δ¹³C_leaf)与枝条渗出液稳定碳同位素比值(δ¹³C_branch), 使用δ¹³C_leaf推导计算7-10月叶片尺度下植物短期水分利用效率(WUE_leaf)变化趋势, 使用δ¹³C_branch明确植物光合作用后分馏情况, 确定半干旱区植物在生长季的水分变化规律对环境因子变化的响应。结果表明: (1) 7-10月4种植物δ¹³C_leaf总体呈现降低趋势, δ¹³C_branch呈现先升高后降低趋势。δ¹³C_leaf在种间和生活型中均存在差异。具体表现为: 灌木>乔木, 常绿乔木(油松) >落叶乔木(刺槐)。研究过程中未发现明显的碳同位素在光合作用后发生分馏的情况。(2) 4种植物WUE_leaf在7-8月保持稳定, 9-10月逐渐升高。21.5 ℃、0.9 kPa、52.4%分别为WUE_leaf随温度(T_a)、饱和水汽压差(VPD)、相对湿度(RH)变化的突变点, 突变点之后4种植物WUE_leaf均表现出稳定的变化趋势, 不再随T_a、VPD、RH升高而降低。(3) WUE_leaf与T_a、RH、VPD之间存在显著负相关关系, T_a通过非气孔因素, 即酶的作用改变光合速率, 引起WUE_leaf变化。RH、VPD等水分因子则通过改变气孔开度, 影响蒸腾, 进而改变WUE_leaf。随着土壤含水量(SWC)的升高, WUE_leaf呈现先升高后降低的趋势。油松林和刺槐林在SWC分别达到15%-18%、13%-14%时, WUE_leaf达到最高值。经过混合线性模型(LMM)分析得到, 油松和刺槐WUE_leaf主导环境因子分别为RH和VPD, 黄刺玫和杠柳WUE_leaf主导环境因子均为T_a。该研究得到了黄土地区典型乔灌木生长季水分利用效率变化的规律和主要环境影响因子, 明确了黄土地区植物对气候因子变化的适应机制。     

Comparison of engineered <Emphasis Type="Italic">Saccharomyces cerevisiae</Emphasis> and engineered <Emphasis Type="Italic">Escherichia coli</Emphasis> for the production of an optically pure keto alcohol

In this study, the production of enantiomerically pure (1R,4S,6S)-6-hydroxy-bicyclo[2.2.2]octane-2-one ((−)-2) through stereoselective bioreduction was used as a model reaction for the comparison of engineered Saccharomyces cerevisiae and engineered Escherichia coli as biocatalysts. For both microorganisms, over-expression of the gene encoding the NADPH-dependent aldo-keto reductase YPR1 resulted in high purity of the keto alcohol (−)-2 (>99% ee, 97–98% de). E. coli had three times higher initial reduction rate but S. cerevisiae continued the reduction reaction for a longer time period, thus reaching a higher conversion of the substrate (95%). S. cerevisiae was also more robust than E. coli, as demonstrated by higher viability during bioreduction. It was also investigated whether the NADPH regeneration rate was sufficient to supply the over-expressed reductase with NADPH. Five strains of each microorganism with varied carbon flux through the NADPH regenerating pentose phosphate pathway were genetically constructed and compared. S. cerevisiae required an increased NADPH regeneration rate to supply YPR1 with co-enzyme while the native NADPH regeneration rate was sufficient for E. coli. Nádia Skorupa Parachin and Magnus Carlquist have contributed equally to the paper.     

Lipase-catalyzed transesterification of soybean oil for biodiesel production in <Emphasis Type="Italic">tert</Emphasis>-amyl alcohol

Lipase-catalyzed transesterification of soybean oil and methanol for biodiesel production in tert-amyl alcohol was investigated. The effects of different organic medium, molar ratio of substrate, reaction temperature, agitation speed, lipase dosage and water content on the total conversion were systematically analyzed. Under the optimal conditions identified (6 mL tert-amyl alcohol, three molar ratio of methanol to oil, 2% Novozym 435 lipase based on the soybean oil weight, temperature 40°C, 2% water content based on soybean oil weight, 150 rpm and 15 h), the highest biodiesel conversion yield of 97% was obtained. With tert-amyl alcohol as the reaction medium, the negative effects caused by excessive molar ratio of methanol to oil and the by-product glycerol could be reduced. Furthermore, there was no evident loss in the lipase activity even after being repeatedly used for more than 150 runs.     

CNI1/ATL31, a RING‐type ubiquitin ligase that functions in the carbon/nitrogen response for growth phase transition in Arabidopsis seedlings

Plants are able to sense and respond to changes in the balance between carbon (C) and nitrogen (N) metabolite availability, known as the C/N response. During the transition to photoautotrophic growth following germination, growth of seedlings is arrested if a high external C/N ratio is detected. To clarify the mechanisms for C/N sensing and signaling during this transition period, we screened a large collection of FOX transgenic plants, overexpressing full‐length cDNAs, for individuals able to continue post‐germinative growth under severe C/N stress. One line, cni1‐D (carbon/nitrogen insensitive 1‐dominant), was shown to have a suppressed sensitivity to C/N conditions at both the physiological and molecular level. The CNI1 cDNA encoded a predicted RING‐type ubiquitin ligase previously annotated as ATL31. Overexpression of ATL31 was confirmed to be responsible for the cni1‐D phenotype, and a knock‐out of this gene resulted in hypersensitivity to C/N conditions during post‐germinative growth. The ATL31 protein was confirmed to contain ubiquitin ligase activity using an in vitro assay system. Moreover, removal of this ubiquitin ligase activity from the overexpressed protein resulted in the loss of the mutant phenotype. Taken together, these data demonstrated that CNI1/ATL31 activity is required for the plant C/N response during seedling growth transition.     

不同类型玉米籽粒的营养品质及其与籽粒质地的关系

测定普通玉米、爆裂玉米、糯玉米和甜玉米4种类型玉米籽粒不同发育时期的直链淀粉、支链淀粉、总淀粉、可溶性糖和蛋白的含量,分析这些营养物质与角质率的关系。结果表明：灌浆期间4种类型玉米的直链淀粉、支链淀粉和总淀粉含量呈上升趋势,总蛋白含量呈下降趋势,可溶性糖含量变化规律不明显。爆裂玉米的直链淀粉含量始终最高（4．7％-23．1％）,甜玉米（1．4％-4．6％）和糯玉米（2．3％-4．9％）的始终较低;甜玉米的支链淀粉含量一直最低（15．7％-35．5％）,除授粉10d以外,糯玉米的支链淀粉含量一直最高（65．5％-69．8％）;甜玉米总淀粉含量始终最低（17．1％36.1％）、总蛋白含量（15．2％-26．9％）和授粉30d后的可溶性糖含量最高（14．2％-17．6％）。高蛋白含量可能是爆裂玉米和甜玉米角质率高的原因,糯玉米的角质率低可能与支链淀粉含量高和蛋白积累少有关。     

Sequence analysis and functional characterization of the promoter of the PiceaglaucaCinnamylAlcoholDehydrogenase gene in transgenic white spruce plants

The enzyme Cinnamyl Alcohol Dehydrogenase (CAD) catalyses the last step of lignin monomer synthesis, and is considered as a molecular marker of cell wall lignification in different plants species. Here, we report the isolation and analysis of 5′ flanking genomic DNA regions upstream to the CAD gene, from two conifers, i.e. white spruce (Picea glauca (Moench) Voss) and loblolly pine (Pinus taeda L.). Sequence comparisons with available CAD gene promoters from angiosperms highlighted the conservation of cis-elements matching MYB, WRKY and bHLH binding sites. Functional characterization of the P. glauca CAD promoter used P. glauca seedlings stably transformed with a DNA fragment of 1,163 base pairs (PgCAD) fused to the β-glucuronidase (GUS) gene. Histochemical observations of different vegetative organs of the transgenic trees showed that this sequence was sufficient to drive GUS expression in lignifying tissues, and more specifically in differentiating xylem cells. Quantitative RT-PCR experiments also indicated that the native CAD gene was preferentially expressed in differentiating xylem both in stems and roots. In addition, GUS expression driven by the PgCAD promoter was wound-inducible which was consistent with the accumulation of CAD mRNA in response to jasmonate application and mechanical wounding. The spruce CAD promoter represents a valuable tool for research and biotechnology applications related to xylem and wood. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Domain motions of hyaluronan lyase underlying processive hyaluronan translocation

Hyaluronan lyase (Hyal) is a surface enzyme occurring in many bacterial organisms including members of Streptococcus species. Streptococcal Hyal primarily degrades hyaluronan‐substrate (HA) of the extracellular matrix. This degradation appears to facilitate the spread of this bacterium throughout host tissues. Unlike purely endolytic degradation of its other substrates, unsulfated chondroitin or some chondroitin sulfates, the degradation of HA by Hyal proceeds by processive exolytic cleavage of one disaccharide at a time following an initial endolytic cut. Molecular dynamics (MD) studies of Hyal from Streptococcus pneumoniae are presented that address the enzyme's molecular mechanism of action and the role of domain motions for processive functionality. The analysis of extensive sub‐microsecond MD simulations of this enzyme action on HA‐substrates of different lengths and the connection between the domain dynamics of Hyal and the translocation of the HA‐substrate reveals that opening/closing and twisting domain motions of the Hyal are intimately linked to processive HA degradation. Enforced simulations confirmed this finding as the domain motions in SpnHyal were found to be induced by enforced substrate translocation. These results establish the dynamic interplay between Hyal flexibility and substrate translocation and provide insight into the processive mechanism of Hyal. Proteins 2009. © 2008 Wiley‐Liss, Inc.     

A method for the analysis of domain movements in large biomolecular complexes

A new method for the analysis of domain movements in large, multichain, biomolecular complexes is presented. The method is applicable to any molecule for which two atomic structures are available that represent a conformational change indicating a possible domain movement. The method is blind to atomic bonding and atom type and can, therefore, be applied to biomolecular complexes containing different constituent molecules such as protein, RNA, or DNA. At the heart of the method is the use of blocks located at grid points spanning the whole molecule. The rotation vector for the rotation of atoms from each block between the two conformations is calculated. Treating components of these vectors as coordinates means that each block is associated with a point in a “rotation space” and that blocks with atoms that rotate together, perhaps as part of the same rigid domain, will have colocated points. Thus a domain can be identified from the clustering of points from blocks that span it. Domain pairs are accepted for analysis of their relative movements in terms of screw axes based upon a set of reasonable criteria. Here, we report on the application of the method to biomolecules covering a considerable size range: hemoglobin, liver alcohol dehydrogenase, S‐Adenosylhomocysteine hydrolase, aspartate transcarbamylase, and the 70S ribosome. The results provide a depiction of the conformational change within each molecule that is easily understood, giving a perspective that is expected to lead to new insights. Of particular interest is the allosteric mechanism in some of these molecules. Results indicate that common boundaries between subunits and domains are good regions to focus on as movement in one subunit can be transmitted to another subunit through such interfaces. Proteins 2009. © 2008 Wiley‐Liss, Inc.     

土壤干旱胁迫对紫叶矮樱叶片呈色的影响

以盆栽3 a紫叶矮樱叶片为试材,采用称重控水法,设对照(土壤含水量18.11%)、轻度干旱(土壤含水量14.72%)、中度干旱(土壤含水量11.32%)和重度干旱(土壤含水量7.92%)4个处理组,研究不同土壤干旱条件下紫叶矮樱叶片呈色色素含量、可溶性糖含量、PAL酶活性的变化规律及其对叶片呈色的影响.结果表明:轻度干旱,随胁迫时间的延长叶片中花青苷、类黄酮、叶绿素、可溶性糖含量、PAL酶活性和a*增加, L*和b*降低;中度和重度干旱,随胁迫时间的延长花青苷、类黄酮、叶绿素、类胡萝卜素、可溶性糖含量、PAL酶活性和a*先增加再降低,L*和b*先减小再增大.短时间的干旱能够提高紫叶矮樱的叶片色泽,中度干旱15 d或重度干旱12 d,是紫叶矮樱叶色发生明显转变的关键时期;花青苷含量的变化是影响紫叶矮樱叶色变化的主要原因.     

天山北坡甜菜内生菌分离鉴定及其动态变化

对新疆昌吉和石河子两地种植的甜菜内生菌进行了分离、鉴定和分析,结果表明甜菜内生菌多属于细菌,其中假单胞菌 (Pseudomonas sp. )和芽孢菌类(Bacillus sp.)的分离频率分别在33.2%～59.2%和12.7%～28.1%,是甜菜植株中的优势内生菌群.16S rDNA 和 ITS 序列同源性比较和系统发育分析表明内生菌具有丰富的多样性.根中内生菌的多样性高于茎、叶,昌吉地区种植的甜菜中分离出的内生菌种类较多.从感病品种及生长不良甜菜植株中分离出的内生菌种类比较丰富.通过回接分离及利用扫描电镜观察内生菌在植物体内分布发现,内生菌能够定殖于甜菜块根.